RNA in preprints: Week 37 edition

Ancient exapted transposable elements drive nuclear localisation of lncRNAs. Joana Carlevaro-Fita, Monalisa Das, Taisia Polidori, Carmen Navarro, Rory Johnson

Sequences enriched in Alu repeats drive nuclear localization of long RNAs in human cells. Yoav Lubelsky, Igor Ulitsky

EIF4A3 associated splicing and nonsense mediated decay defined by a systems analysis with novel small molecule inhibitors. Alborz Mazloomian, Shinsuke Araki, Momoko Oohori, Damian Yap, Shoichi Nakao, Atsushi Nakanishi, Sohrab Shah, Samuel Aparicio.

High-throughput identification of RNA nuclear enrichment sequences. Chinmay J Shukla, Alexandra L McCorkindale, Chiara Gerhardinger, Keegan D Korthauer, Moran N Cabili, David M Shechner, Rafael A Irizarry, Philipp G Maass, John L Rinn

Biomarker evaluation of plasma microRNA-122, high-mobility group box-1 and keratin-18 in acute gallstone disease. Francesca Th’ng, Bastiaan Vliegenthart, Jonathan D Lea, Daniel J Antoine, James W Dear, Damian James Mole

Deep learning of the splicing (epi)genetic code reveals a novel candidate mechanism linking histone modifications to ESC fate decision. Yungang Xu, Yongcui Wang, Jiesi Luo, Weiling Zhao, Xiaobo Zhou

CRISPR-based Herd Immunity Limits Phage Epidemics in Bacterial Populations. Pavel Payne, Lukas Geyrhofer, Nicholas H. Barton, Jonathan P. Bollback

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection. Ye Jimmie Chun, Jenny Chen, Alexandra-Chloe Villani, Meena Subramaniam, Rachel E Gate, Tushar Bhangale, Mark N Lee, Towfique Raj, Raktima Raychowdhury, Weibo Li, Noga Rogel, Selina H Imboywa, Portia I Chipendo, Cristin McCabe, Michelle H Lee, Irene Y Frohlich, Barbara E Stranger, Philip L De Jager, Aviv Regev, Tim Behrens, Nir Hacohen

Motif signatures of transcribed enhancers. Dimitrios Kleftogiannis, Haitham Ashoor, Nikolaos Zarokanellos, Vladimir B. Bajic

A potential link between tuberculosis and lung cancer through non-coding RNAs. Debmalya Barh, Sandeep Tiwari, Ranjith N. Kumavath, Vasco Azevedo

Mitochondrial Dual-coding Genes in Trypanosoma brucei. Laura E. Kirby, Donna Koslowsky

The U2AF homology motif kinase 1 (UHMK1) is upregulated upon hematopoietic cell differentiation. Isabella Barbutti, Joao Agostinho Machado-Neto, Vanessa Cristina Arfelli, Paula de Melo Campos, Fabiola Traina, Sara Teresinha Olalla Saad, Leticia Froehlich Archangelo

Paupar LncRNA Promotes KAP1 Dependent Chromatin Changes And Regulates Subventricular Zone Neurogenesis. Ioanna Pavlaki, Farah Alammari, Bin Sun, Neil Clark, Tamara Sirey, Sheena Lee, Dan J. Woodcock, Chris P. Ponting, Francis G. Szele, Keith W. Vance

Antisense transcription-dependent chromatin signature modulates sense transcription and transcript dynamics. Thomas Brown, Francoise S. Howe, Struan C. Murray, Emily Seward, Scott Rata, Andrew Angel, Jane Mellor

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