RNA preprints: week 39 edition

Discovery of global regulators of 3’ untranslated region processing in cancers with KAPAC. Andreas J Gruber, Ralf Schmidt, Souvik Ghosh, Georges Martin, Andreas R Gruber, Erik van Nimwegen, Mihaela Zavolan

Spatial RNA proximities reveal a bipartite nuclear transcriptome and territories of differential density and transcription elongation rates. Jorg Morf, Steven W. Wingett, Irene Farabella, Jonathan Cairns, Mayra Furlan-Magaril, Xin Liu, Frank F. Craig, Simon Andrews, Marc A. Marti-Renom, Peter Fraser

MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs. Saima Shahid, Gunjune Kim, Nathan R. Johnson, Eric Wafula, Feng Wang, Ceyda Coruh, Vivian Bernal-Galeano, Tamia Phifer, Claude W. dePamphilis, James H. Westwood, Michael Axtell

Genome-Wide Characterization Of Differential Transcript Usage In Arabidopsis thaliana. Dries Vaneechoutte, April Roberts Estrada, Ying-Chen Lin, Ann Loraine, Klaas Vandepoele

MicroRNA miR-128 represses LINE-1 (L1) retrotransposition by downregulating the nuclear import factor TNPO1. Adam Idica, Evgueni Sevrioukov, Dimitri Zisoulis, Matthias Hamdorf, Iben Daugaard, Pavan Kadandale, Irene Pedersen

Interferon-inducible miR-128 modulates HIV-1 replication by targeting TNPO3 mRNA. Irene Pedersen, Aurore Bochnakiem, Dimitri Zisoulis, Adam Idica, Anjie Zhen, Vineet KewalRamani, Iben Daugaard, Matthias Hamdorf, Scott Kitchen, KyeongEun Lee

A comprehensive characterization of cis-acting splicing-associated variants in human cancer. Yuichi Shiraishi, Keisuke Kataoka, Kenichi Chiba, Ai Okada, Yasunori Kogure, Hiroko Tanaka, Seishi Ogawa, Satoru Miyano

Proto-ribosome: a theoretical approach based on RNA relics. Jacques Demongeot

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