RNA preprints: Week 50 edition

A cytoplasmic Argonaute protein promotes the inheritance of RNAi. Fei Xu, Xuezhu Feng, Xiangyang Chen, Chenchun Weng, Qi Yan, Ting Xu, Minjie Hong, Shouhong Guang

Genome-wide post-transcriptional dysregulation by microRNAs in human asthma as revealed by Frac-seq. Rocio Teresa Martinez-Nunez, Hitasha Rupani, Manuela Plate, Mahesan Niranjan, Rachel C Chambers, Peter H Howarth, Tilman Sanchez-Elsner

An antisense RNA capable of modulating the expression of the tumour suppressor microRNA-34a. Jason T Serviss, Felix Clemens Richter, Jimmy Van den Eynden, Nathanael Andrews, Miranda Houtman, Mattias Vesterlund, Laura Schwarzmueller, Per Johnsson, Erik Larsson Lekholm, Dan Grandér, Katja Pokrovskaja Tamm

Transcription start site analysis reveals widespread divergent transcription in D. melanogaster and core promoter-encoded enhancer activities. Sarah Rennie, Maria Dalby, Marta Lloret-Llinares, Stylianos Bakoulis, Christian Dalager Vaagenso, Torben Heick Jensen, Robin Andersson

Transcription establishes microenvironments that organize euchromatin. Lennart Hilbert, Yuko Sato, Hiroshi Kimura, Frank Jülicher, Alf Honigmann, Vasily Zaburdaev, Nadine Vastenhouw

CLAN: the CrossLinked reads ANalysis tool. Cuncong Zhong, Shaojie Zhang

mRNA structure determines specificity of a polyQ-driven phase separation. Erin M Langdon, Peggy Billingsly, Amirhossein Ghanbari Niaki, Grace McLaughlin, Chase Weidmann, Therese Gerbich, Christina M Termini, Kevin M Weeks, Sua Myong, Amy Gladfelter

Conserved microRNA targeting reveals preexisting gene dosage sensitivities that shaped amniote sex chromosome evolution. Sahin Naqvi, Daniel W Bellott, Kathy S Lin, David C Page

Cytoplasmic import and processing of mRNA amplify transcriptional bursts accounting for the majority of cellular noise. Maike M. K. Hansen, Ravi V. Desai, Michael L. Simpson, Leor S. Weinberger

Complemented palindrome small RNAs first discovered from SARS coronavirus. Chang Liu, Ze Chen, Wenyuan Shen, Deshui Yu, Siyu Li, Yue Hu, Haishuo Ji, Wenjun Bu, Qingsong Wang, Shan Gao

Combination of mitochondrial tRNA and OXPHOS mutation reduces lifespan and physical condition in aged mice. Gesine Reichart, Johannes Mayer, Tursonjan Tokay, Falko Lange, Cindy Johne, Simone Baltrusch, Markus Tiedge, Georg Fuellen, Saleh Ibrahim, Rudiger Kohling

Structurally conserved primate lncRNAs are transiently expressed during human cortical differentiation and influence cell type specific genes. Andrew R. Field, Frank M.J. Jacobs, Ian T. Fiddes, Alex P.R. Phillips, Andrea M. Reyes-Ortiz, Erin LaMontagne, Lila Whitehead, Vincent Meng, Jimi L. Rosenkrantz, Maximillian Haeussler, Sol Katzman, Sofie R. Salama, David Haussler

Mir-132 controls beta cell proliferation and survival in mouse model through the PTEN/AKT/FOXO3 signaling. Hassan Mziaut, Georg Henniger, Katharina Ganss, Sebastian Hempel, Steffen Wolk, Johanna McChord, Kamal Chowdhury Chowdhury, Klaus Peter Knoch, Jurgen Weitz, Michele Solimena, Stephan Kersting

Characterizing highly dynamic conformational states: the transcription bubble in RNAP-promoter open complex as an example. Eitan Lerner, Antonino Ingargiola, Shimon Weiss

Human iPSC-derived RPE and retinal organoids reveal impaired alternative splicing of genes involved in pre-mRNA splicing in PRPF31 autosomal dominant retinitis pigmentosa. Adriana Buskin, Lili Zhu, Valeria Chichagova, Basudha Basu, Sina Mozaffari-Jovin, David Dolan, Alastair Droop, Joseph Collin, Revital Bronstein, Sudeep Mehrotra, Michael Farkas, Gerrit Hilgen, Kathryn White, Dean Hallam, Katarzyna Bialas, Git Chung, Carla Mellough, Yuchun Ding, Natalio Krasnogor, Stefan Przyborski, Jumana Al-Aama, Sameer Alharthi, Yaobo Xu, Gabrielle Wheway, Katarzyna Szymanska, Martin McKibbin, Chris F Inglehearn, David J Elliott, Susan Lindsay, Robin R Ali, David H Steel, Lyle Armstrong, Evelyne Sernagor, Eric Pierce, Reinhard Luehrmann, Sushma-Nagaraja Grellscheid, Colin A Johnson, Majlinda Lako

GDCRNATools: an R/Bioconductor package for integrative analysis of lncRNA, miRNA, and mRNA data in GDC. Ruidong Li, Han Qu, Shibo Wang, Julong Wei, Le Zhang, Renyuan Ma, Jianming Lu, Jianguo Zhu, Wei-De Zhong, Zhenyu Jia

Cell-wall synthesis and ribosome maturation are co-regulated by an RNA switch in Mycobacterium tuberculosis. Stefan Schwenk, Alexandra Moores, Irene Nobeli, Timothy D McHugh, Kristine Bourke Arnvig

_____

That’s a wrap! Did we miss something? Let us know!

Advertisements

Leave a Reply

Fill in your details below or click an icon to log in:

WordPress.com Logo

You are commenting using your WordPress.com account. Log Out /  Change )

Google photo

You are commenting using your Google account. Log Out /  Change )

Twitter picture

You are commenting using your Twitter account. Log Out /  Change )

Facebook photo

You are commenting using your Facebook account. Log Out /  Change )

Connecting to %s