RNA preprints: W11/2019

Comprehensive Classification of the RNaseH-like domain-containing Proteins in Plants. Shuai Li, Kunpeng Liu, Qianwen Sun

Sen1 is required for RNA Polymerase III transcription termination in an R-loop independent manner. Julieta Rivosecchi, Marc Larochelle, Camille Teste, Frédéric Grenier, Amélie Malapert, Emiliano P. Ricci, Pascal Bernard, François Bachand, Vincent Vanoosthuyse

MicroRNA Overexpression screen reveals a noncanonical role of CDK2 in regulating neutrophil migration. Alan Y. Hsu, Decheng Wang, Sheng Liu, Justice Lu, Ramizah Syahirah, David A. Bennin, Anna Huttenlocher, Jun Wan, Qing Deng

Genome-wide profiling of microRNAs and prediction of mRNA targets in 17 bovine tissues. Min Wang, Amanda J Chamberlain, Claire P Prowse-Wilkins, Christy J Vander Jagt, Timothy P Hancock, Jennie E Pryce, Benjamin G Cocks, Mike E Goddard, Benjamin J Hayes

Single-base mapping of m6A by an antibody-independent method. Zhang Zhang, Li-Qian Chen, Yu-Li Zhao, Cai-Guang Yang, Ian A Roundtree, Zijie Zhang, Jian Ren, Wei Xie, Chuan He, Guan-Zheng Luo

MicroRNA-transcriptome networks in whole blood and monocytes of women undergoing preterm labor. Alison G. Paquette, Oksana Shynlova, Xiaogang Wu, Mark Kibschull, Kai Wang, Nathan D. Price, Stephen J Lye

Plasma Circular RNA Panel to Diagnose Hepatitis B Virus-Related Hepatocellular Carcinoma. Jian Yu, Meng-chao Wang, Wen-bing Ding, Xing-gang Guo, Jian Xu, Qing-guo Xu, Yuan Yang, Shu-han Sun, Jing-feng Liu, Lun-xiu Qin, Hui Liu, Fu Yang, Wei-ping Zhou

Germ Granules Functions are Memorized by Transgenerationally Inherited Small RNAs. Itamar Lev, Itai Antoine Toker, Yael Mor, Anat Nitzan, Guy Weintraub, Ornit Bhonkar, Itay Ben Shushan, Uri Seroussi, Julie M. Claycomb, Hila Gingold, Ronen Zaidel-Bar, Oded Rechavi

NET-prism enables RNA polymerase-dedicated transcriptional interrogation at nucleotide resolution. Constantine Mylonas, Peter Tessarz

Non-coding AUG circRNAs constitute an abundant and conserved subclass of circles. Lotte VW Stagsted, Katrine M Nielsen, Iben Daugaard, Thomas B Hansen

Inducible overexpression of zebrafish microRNA-722 suppresses chemotaxis of human neutrophil like cells. Alan Y. Hsu, Sheng Liu, Kent A. Brasseale, Ramizah Syahirah, Jun Wan, Qing Deng

A non-Dicer RNase III and four other novel factors required for RNAi-mediated transposon suppression in the human pathogenic yeast C. neoformans. Jordan E. Burke, Adam D. Longhurst, Prashanthi Natarajan, Beiduo Rao, S. John Liu, Jade Sales-Lee, Yasaman Mortensen, James J. Moresco, Jolene K. Diedrich, John R. Yates III, Hiten D. Madhani

RBPSponge: genome-wide identification of lncRNAs that sponge RBPs. Saber HafezQorani, Aissa Houdjedj, Mehmet Arici, Abdesselam Said, Hilal Kazan

Direct proteolytic control of an extracytoplasmic function RNA polymerase sigma factor. Bohdan Bilyk, Sora Kim, Tania A Baker, Ryan F Seipke

Somatic mutations in miRNA genes in lung cancer – potential functional consequences of non-coding sequence variants. Paulina Galka-Marciniak, Martyna Olga Urbanek-Trzeciak, Paulina Maria Nawrocka, Agata Dutkiewicz, Maciej Giefing, Marzena Anna Lewandowska, Piotr Kozlowski

Hundreds of yeast mRNAs form a separately addressable, translation elongation-controlled regulon. Eleanna Kazana, Tobias von der Haar

Hearing impairment due to Mir183/96/182 mutations suggests both loss and gain of function effects. Morag A Lewis, Francesca Di Domenico, Neil J Ingham, Haydn M Prosser, Karen P Steel

Direct interaction of PIWI and DEPS-1 is essential for piRNA function and condensate ultrastructure in Caenorhabditis elegans. Kin Man Suen, Fabian Braukmann, Richard Butler, Dalila Bensaddek, Alper Akay, Chi-Chuan Lin, Neel Doshi, Alexandra Sapetschnig, Angus I Lamond, John E Ladbury, Eric Alexander Miska

A Musashi-Related Protein Is Essential For Gametogenesis In Arabidopsis. Laura A Moody, Ester Rabbinowitsch, Hugh G Dickinson, Roxaana Clayton, David M Emms, Jane Langdale

Two ecotype-related long non-coding RNAs in the environmental control of root growth. Thomas Blein, Coline Balzergue, Thomas Roulé, Marc Gabriel, Laetitia Scalisi, Céline Sorin, Aurélie Christ, Etienne Delannoy, Marie-Laure Martin-Magniette, Laurent Nussaume, Caroline Hartmann, Daniel Gautheret, Thierry Desnos, Martin Crespi

The RNA encoding the microtubule-associated protein tau has extensive structure that affects its biology. Jonathan L Chen, Walter N Moss, Adam Spencer, Peiyuan Zhang, Jessica L Childs-Disney, Matthew D Disney

An RNA-binding protein secreted by Listeria monocytogenes activates RIG-I signaling. Alessandro Pagliuso, To Nam Tham, Eric Allemand, Stevens Robertin, Bruno Dupuy, Quentin Bertrand, Christophe Bécavin, Mikael Koutero, Valérie Najburg, Marie-Anne Nahori, Fabrizia Stavru, Andréa Dessen, Christian Muchard, Alice Lebreton, Anastassia V Komarova, Pascale Cossart

AptaBlocks Online – A web-based toolkit for the in-silico assembly of RNA complexes. Jan Hoinka, Yijie Wang, Teresa M. Przytycka

HIV-1 virus cycle replication: a review of RNA polymerase II transcription, alternative splicing and protein synthesis. Miguel Ramos Pascual

Advertisements

Leave a Reply

Fill in your details below or click an icon to log in:

WordPress.com Logo

You are commenting using your WordPress.com account. Log Out /  Change )

Google photo

You are commenting using your Google account. Log Out /  Change )

Twitter picture

You are commenting using your Twitter account. Log Out /  Change )

Facebook photo

You are commenting using your Facebook account. Log Out /  Change )

Connecting to %s